brainmaker software Search Results


brainmaker software  (MBF Bioscience)
90
MBF Bioscience brainmaker software
(a) Coronal sections from the brain are collected in a plate of 10 wells, with successive sections being placed in sequence in well 1 through 10 and then repeated such that each well contains a 1 in 10 series through the brain. Sections are processed for immunohistochemical labeling and then mounted onto slides, with each slide containing a 1 in 10 series, which are imaged. (b) The <t>BrainMaker</t> software (MBF Bioscience) first outlines the individual section on each slide and then renumbers them to put them in sequence for the whole brain. Beginning with section 1 adjacent sections in the whole brain series are then overlain and aligned automatically and adjusted manually. (c) The aligned whole brain image is reconstructed into a stack of images, which may be viewed in coronal (XY), topdown (XZ), sagittal (YZ) or 3D views
Brainmaker Software, supplied by MBF Bioscience, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/brainmaker software/product/MBF Bioscience
Average 90 stars, based on 1 article reviews
brainmaker software - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
brainmaker professional 3.2 software  (Verlag GmbH)
90
Verlag GmbH brainmaker professional 3.2 software
(a) Coronal sections from the brain are collected in a plate of 10 wells, with successive sections being placed in sequence in well 1 through 10 and then repeated such that each well contains a 1 in 10 series through the brain. Sections are processed for immunohistochemical labeling and then mounted onto slides, with each slide containing a 1 in 10 series, which are imaged. (b) The <t>BrainMaker</t> software (MBF Bioscience) first outlines the individual section on each slide and then renumbers them to put them in sequence for the whole brain. Beginning with section 1 adjacent sections in the whole brain series are then overlain and aligned automatically and adjusted manually. (c) The aligned whole brain image is reconstructed into a stack of images, which may be viewed in coronal (XY), topdown (XZ), sagittal (YZ) or 3D views
Brainmaker Professional 3.2 Software, supplied by Verlag GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/brainmaker professional 3.2 software/product/Verlag GmbH
Average 90 stars, based on 1 article reviews
brainmaker professional 3.2 software - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
brainmaker software  (Alyuda Research Inc)
90
Alyuda Research Inc brainmaker software
(a) Coronal sections from the brain are collected in a plate of 10 wells, with successive sections being placed in sequence in well 1 through 10 and then repeated such that each well contains a 1 in 10 series through the brain. Sections are processed for immunohistochemical labeling and then mounted onto slides, with each slide containing a 1 in 10 series, which are imaged. (b) The <t>BrainMaker</t> software (MBF Bioscience) first outlines the individual section on each slide and then renumbers them to put them in sequence for the whole brain. Beginning with section 1 adjacent sections in the whole brain series are then overlain and aligned automatically and adjusted manually. (c) The aligned whole brain image is reconstructed into a stack of images, which may be viewed in coronal (XY), topdown (XZ), sagittal (YZ) or 3D views
Brainmaker Software, supplied by Alyuda Research Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/brainmaker software/product/Alyuda Research Inc
Average 90 stars, based on 1 article reviews
brainmaker software - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

Image Search Results


(a) Coronal sections from the brain are collected in a plate of 10 wells, with successive sections being placed in sequence in well 1 through 10 and then repeated such that each well contains a 1 in 10 series through the brain. Sections are processed for immunohistochemical labeling and then mounted onto slides, with each slide containing a 1 in 10 series, which are imaged. (b) The BrainMaker software (MBF Bioscience) first outlines the individual section on each slide and then renumbers them to put them in sequence for the whole brain. Beginning with section 1 adjacent sections in the whole brain series are then overlain and aligned automatically and adjusted manually. (c) The aligned whole brain image is reconstructed into a stack of images, which may be viewed in coronal (XY), topdown (XZ), sagittal (YZ) or 3D views

Journal: The Journal of comparative neurology

Article Title: Whole Mouse Brain Reconstruction and Registration to a Reference Atlas with Standard Histochemical Processing of Coronal Sections

doi: 10.1002/cne.24602

Figure Lengend Snippet: (a) Coronal sections from the brain are collected in a plate of 10 wells, with successive sections being placed in sequence in well 1 through 10 and then repeated such that each well contains a 1 in 10 series through the brain. Sections are processed for immunohistochemical labeling and then mounted onto slides, with each slide containing a 1 in 10 series, which are imaged. (b) The BrainMaker software (MBF Bioscience) first outlines the individual section on each slide and then renumbers them to put them in sequence for the whole brain. Beginning with section 1 adjacent sections in the whole brain series are then overlain and aligned automatically and adjusted manually. (c) The aligned whole brain image is reconstructed into a stack of images, which may be viewed in coronal (XY), topdown (XZ), sagittal (YZ) or 3D views

Article Snippet: Once the brain sections have been imaged, they are registered and reconstructed into a whole brain image volume using the BrainMaker software (MBF Bioscience, Williston, VT).

Techniques: Sequencing, Immunohistochemical staining, Labeling, Software